About

Biomarker-AI

An intelligent biomarker discovery platform powered by AI agents, unifying fragmented biological knowledge across cell types, pathways, and clinical research.

What We Do

Biomarker-AI is an agentic knowledge base that unifies 20+ curated databases across four critical biological domains—cell type markers, transcriptional regulation, cell-cell communication, and biological pathways—enabling researchers to query using natural language.

AI-Powered Discovery

Unlike traditional keyword-based databases, our platform uses Large Language Model (LLM) agents to understand biological context and complex queries. Ask questions in plain English— the AI synthesizes responses from its integrated knowledge graph.

Key Features

1

Natural Language Queries

Ask complex biological questions without specialized query syntax

2

Context-Aware Retrieval

LLM agents filter results based on semantic meaning, not just keywords

3

Cross-Database Integration

Seamlessly query across 20+ databases spanning multiple biological domains

4

Living Knowledge Base

Interactive platform with intelligent retrieval and analysis capabilities

Technology

LLM Agents

Advanced language models for semantic understanding and biological reasoning

Knowledge Graph

Integrated network connecting biomarkers across cell types and pathways

Analysis Pipeline

Built-in tools for enrichment analysis and visualization

Contact

Shenghui Huang

hsh-me@outlook.com

Our Mission

Accelerating precision medicine through AI-driven biomarker discovery and integrated analytics